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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008487.1_1271_2053_R

Intron Information:

Intron Rank:

142418

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

1271 - 2053

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

AT-AA

5'SS Sequence:

AAA|ATAGCCATT

5'SS Class:

weak_minor

3'SS Sequence:

AATCCCCTCAAAA|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

ATCCCCTCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

34.1

-0.9

3.4

57.3

47.4

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

35.6

-0.8

3.1

48.8

33.5

Minor 5ss

52.4

0.08

3.4

82.6

34.4

Minor BPS

55.6

0.17

1.7

65.34

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023929

Chromosome:

PEDO01008487.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044077

21 - 2770

2750