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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008498.1_23830_23957_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23830 - 23957

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGC

5'SS Class:

strong_major

3'SS Sequence:

AAATAGCTTGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

CTAACATGAACC

Flanking Amino Acid:

FHNTHDVTSPSNMACAGCAV

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

75.6

35.3

Major BPS

70.1

0.5

70.3

31.9

Major PPT

53.1

0.07

1.2

50.1

42.8

Minor 5ss

39.9

-1.1

2.9

44.2

Minor BPS

50.2

-0

1.8

62.67

41.9

Associated Gene:

Gene:

TRIM36

Ensembl Gene ID:

ENSAPLG00000012189

Chromosome:

PEDO01008498.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012713

23778 - 32505

8728