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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008498.1_26970_28075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26970 - 28075

Intron Length:

1106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTATTTTGACA

Flanking Amino Acid:

TMSTAYKTLKEKLSKDIEYL

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.6

30.5

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

82.6

0.73

37.5

Minor 5ss

33.4

-1.9

3.6

46.9

48.4

Minor BPS

70.2

0.63

1.2

78.33

31.5

Associated Gene:

Gene:

TRIM36

Ensembl Gene ID:

ENSAPLG00000012189

Chromosome:

PEDO01008498.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012713

23778 - 32505

8728

ENSAPLT00000045372

23103 - 32373

9271