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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008498.1_28223_32214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28223 - 32214

Intron Length:

3992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CACACCTTCATT

Flanking Amino Acid:

VGPTTNFRPKILMCPEHEME

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.5

33.9

Major BPS

73.8

0.59

1.3

72.8

Major PPT

100

1.12

0.4

100

Minor 5ss

30.6

-2.2

2.5

34.1

41.4

Minor BPS

51.7

0.13

1.8

65.34

45.5

Associated Gene:

Gene:

TRIM36

Ensembl Gene ID:

ENSAPLG00000012189

Chromosome:

PEDO01008498.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045372

23103 - 32373

9271

ENSAPLT00000012713

23778 - 32505

8728