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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008505.1_1085_1456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1085 - 1456

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGGGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGGAAT

U12 Branch Point Sequence:

CTCTAGGAATTT

Flanking Amino Acid:

IRDMEKLDEMEFNPVQQPQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

51.7

0.04

1.5

61.7

43.1

Major PPT

60.9

0.25

1.1

61.7

44.5

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

29.9

-1.4

2.6

47.33

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014728

Chromosome:

PEDO01008505.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015381

306 - 4358

4053