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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008505.1_1654_4157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1654 - 4157

Intron Length:

2504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CATTTCCTAATA

Flanking Amino Acid:

QLSQYFDAVKDSEGTMTICL

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

77.4

37.4

Major BPS

81.9

0.79

0.9

80.1

Major PPT

82.8

0.74

0.8

77.6

31.2

Minor 5ss

-1.4

3.3

57.1

Minor BPS

59.9

0.31

1.7

68.65

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014728

Chromosome:

PEDO01008505.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015381

306 - 4358

4053