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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008515.1_1046_1180_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1046 - 1180

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCCCT

5'SS Class:

major

3'SS Sequence:

GTGACGCTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTGAT

U12 Branch Point Sequence:

GATGCCGTGACG

Flanking Amino Acid:

LSTYQTDFVLVRERDLPVVI

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

64.1

41.7

Major BPS

53.7

0.09

1.4

46.5

Major PPT

56.2

0.14

1.1

46.8

45.8

Minor 5ss

35.2

-1.7

3.1

45.9

43.3

Minor BPS

47.9

-0.3

2.2

56.11

45.2

Associated Gene:

Gene:

CASTOR1

Ensembl Gene ID:

ENSAPLG00000026142

Chromosome:

PEDO01008515.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031957

21 - 2102

2082