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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008515.1_1314_1519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1314 - 1519

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

GTGGCGGTGACG

Flanking Amino Acid:

ASNGFLKPKAATSPTLHPVQ

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

0.43

0.9

62.1

34.8

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

39.3

-0.9

2.6

46.53

46.7

Associated Gene:

Gene:

CASTOR1

Ensembl Gene ID:

ENSAPLG00000026142

Chromosome:

PEDO01008515.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031957

21 - 2102

2082