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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008515.1_487_851_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

487 - 851

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGTGCA

5'SS Class:

major

3'SS Sequence:

CTCTCCCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

CGTGCCTCAGTT

Flanking Amino Acid:

RPQGHGSLEPELPPSEFMQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

38.8

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

78.1

0.63

0.7

72.5

25.6

Minor 5ss

25.7

-2.8

3.1

23.1

37.4

Minor BPS

47.9

-0

1.9

64.73

45.9

Associated Gene:

Gene:

CASTOR1

Ensembl Gene ID:

ENSAPLG00000026142

Chromosome:

PEDO01008515.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031957

21 - 2102

2082