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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008544.1_1383_1456_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1383 - 1456

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCACGCGTGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

GTGGGGGTGACG

Flanking Amino Acid:

LCALPGVGTKVADCVCLMAL

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

52.5

0.06

1.1

45.8

41.2

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

32.7

-1.5

2.7

38.2

45.3

Associated Gene:

Gene:

OGG1

Ensembl Gene ID:

ENSAPLG00000019992

Chromosome:

PEDO01008544.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025785

21 - 2224

2204