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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_11427_11670_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11427 - 11670

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CATCTCTCACCG

Flanking Amino Acid:

TELELQERGRGHPAHLAPPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

72.7

0.56

30.1

Major PPT

66.8

0.38

0.8

57.2

32.2

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

45.6

-0.4

1.9

49.76

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012834

11099 - 17188

6090