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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_11800_11940_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11800 - 11940

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCACCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

CCTGCTGCCACC

Flanking Amino Acid:

ILASMPSRTIGRSRGAIISQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

-0.2

1.4

53.5

Major PPT

65.8

0.36

0.9

58.6

31.8

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

36.9

-1

2.4

45.01

44.2

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012834

11099 - 17188

6090