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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_12100_12218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12100 - 12218

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAG

U12 Branch Point Sequence:

TCCTACTGAGCC

Flanking Amino Acid:

ESDPARATLQDKRSLLAKEL

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

59.6

0.24

1.5

57.3

41.7

Major PPT

71.4

0.48

0.9

61.9

39.9

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

48.3

-0.1

1.9

60.21

44.6

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129

ENSAPLT00000012834

11099 - 17188

6090