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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_12854_13034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12854 - 13034

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CACTTTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTCAC

U12 Branch Point Sequence:

TTGTTGTGCACT

Flanking Amino Acid:

FAGFELLTGAGYFTHSLLYY

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

70.1

40.6

Major BPS

0.02

1.3

54.8

42.1

Major PPT

74.6

0.55

0.8

68.4

31.6

Minor 5ss

41.1

-1

2.8

54.5

42.5

Minor BPS

45.3

-0.2

2.5

71.85

45.3

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012834

11099 - 17188

6090

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129