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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_13226_13312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13226 - 13312

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CCTGCCGCCACC

Flanking Amino Acid:

FFATCILLVYSMYRSFGESY

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

68.8

43.8

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

70.8

0.47

0.9

64.1

31.1

Minor 5ss

28.2

-2.5

2.7

32.3

42.2

Minor BPS

39.2

-0.8

2.5

49.56

47.2

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129

ENSAPLT00000012834

11099 - 17188

6090