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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_13458_13674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13458 - 13674

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TGCTCAGCAGCT

Flanking Amino Acid:

QCENICTQLKELLAERRSRS

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

78.5

0.64

0.9

69.2

41.8

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

40.4

-0.6

2.4

62.31

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012834

11099 - 17188

6090

ENSAPLT00000034068

11099 - 19227

8129