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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_13831_14013_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13831 - 14013

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

GCCTGCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

TCAGGCTCACCC

Flanking Amino Acid:

VHYLLEHMHVVQQEHRALAG

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.7

37.6

Major BPS

52.1

0.05

1.3

41.8

Major PPT

64.9

0.34

1.1

43.3

Minor 5ss

36.8

-1.5

3.3

44.7

44.3

Minor BPS

41.8

-0.6

2.2

50.78

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000012834

11099 - 17188

6090