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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_14190_14334_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14190 - 14334

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCTGC

5'SS Class:

major

3'SS Sequence:

TGCTGCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

TAGGGCTCAGGG

Flanking Amino Acid:

PAVEVYVAICRNLLLKMLVL

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

60.1

41.9

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

75.4

0.57

0.9

65.7

Minor 5ss

37.4

-1.4

3.3

49.7

46.9

Minor BPS

35.1

-1.2

2.2

36.23

45.4

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129

ENSAPLT00000012834

11099 - 17188

6090