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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_14417_14745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14417 - 14745

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGCGCT

5'SS Class:

major

3'SS Sequence:

TTTGTCTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

CTCGTGCCACCC

Flanking Amino Acid:

SRRVVCSDEECWETCVGQDL

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.3

61.8

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

81.4

0.71

0.8

73.7

36.9

Minor 5ss

33.9

-1.8

3.5

48.3

47.4

Minor BPS

30.8

-1.4

2.2

37.62

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012834

11099 - 17188

6090

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129