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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_14844_14963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14844 - 14963

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGTGC

5'SS Class:

major

3'SS Sequence:

TCTCGTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAG

U12 Branch Point Sequence:

GCTGTCAGAGCA

Flanking Amino Acid:

LDTIFGELVFRLISEKRLKR

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

64.8

42.3

Major BPS

49.4

-0

1.7

60.7

45.9

Major PPT

0.67

0.8

72.1

37.9

Minor 5ss

42.6

-0.8

3.2

59.3

45.5

Minor BPS

-0.6

1.9

49.44

41.3

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129

ENSAPLT00000012834

11099 - 17188

6090