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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_15828_16045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15828 - 16045

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGGAG

U12 Branch Point Sequence:

TGCTCCTTGTCC

Flanking Amino Acid:

KLLLLFYIKKTSLMQNCQAP

Intron Amino Acid Position:

619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

75.1

34.9

Major BPS

-0.4

1.8

42.8

49.4

Major PPT

76.5

0.6

0.8

68.5

37.4

Minor 5ss

28.8

-2.4

3.3

41.4

45.1

Minor BPS

47.3

-0.2

3.5

70.44

41.4

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129

ENSAPLT00000012834

11099 - 17188

6090