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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_16180_16524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16180 - 16524

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

TCTGTCCGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAA

U12 Branch Point Sequence:

TCCGACTGACCC

Flanking Amino Acid:

AAVFISYIIWSVKPSETCGP

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.3

67.6

37.6

Major BPS

58.2

0.2

1.1

37.5

Major PPT

71.6

0.49

0.9

69.3

36.9

Minor 5ss

33.1

-1.9

2.6

38.9

32.7

Minor BPS

43.6

-0.5

1.9

51.54

45.4

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129

ENSAPLT00000012834

11099 - 17188

6090