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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_16702_16872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16702 - 16872

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

CCTGTCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CCATCCCCATCG

Flanking Amino Acid:

FFLFFVSGVLLAMTYCHIQV

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

71.2

40.3

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

75.3

0.57

0.9

68.4

37.3

Minor 5ss

36.8

-1.5

2.9

52.3

44.3

Minor BPS

41.9

-0.7

2.1

45.1

46.6

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129

ENSAPLT00000012834

11099 - 17188

6090