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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008630.1_16952_17116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16952 - 17116

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGCGTGAG

5'SS Class:

major

3'SS Sequence:

TCTGCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

GGCTGCTCACTG

Flanking Amino Acid:

ICLLKEQIANEGEDKIFLIE

Intron Amino Acid Position:

749

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

61.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

78.6

0.64

0.9

72.4

37.7

Minor 5ss

27.9

-2.5

3.3

34.8

41.9

Minor BPS

40.2

-0.8

2.1

40.63

43.8

Associated Gene:

Gene:

TMC6

Ensembl Gene ID:

ENSAPLG00000012310

Chromosome:

PEDO01008630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034068

11099 - 19227

8129

ENSAPLT00000020120

11099 - 19227

8129

ENSAPLT00000012834

11099 - 17188

6090