Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008633.1_445_572_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

445 - 572

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCTGT

5'SS Class:

major

3'SS Sequence:

GCGTCTCCGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TCTCCCCAGATG

Flanking Amino Acid:

LSLRLAAPVSNASMTQQLLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

72.5

39.9

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

62.2

0.28

54.4

41.4

Minor 5ss

47.3

-0.3

2.9

64.8

40.8

Minor BPS

44.7

-0.5

52.5

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007382

Chromosome:

PEDO01008633.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007658

395 - 1110

716