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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008668.1_416_972_F

Intron Information:

Intron Rank:

148961

Intron Class:

major

Intron Phase:

Intron Coordinates:

416 - 972

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

CACCCAACAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

82.3

0.73

0.8

73.7

36.6

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

41.2

-0.6

1.9

47.9

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030128

Chromosome:

PEDO01008668.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021110

21 - 2245

2225