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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008705.1_2232_3175_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2232 - 3175

Intron Length:

944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCAATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TATTTCTGAAAA

Flanking Amino Acid:

KLDLDEDRIQIWFQNRRAKL

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

85.1

25.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

74.9

0.56

0.9

71.7

38.3

Minor 5ss

35.1

-1.7

2.7

42.4

44.3

Minor BPS

65.4

0.48

1.5

74.86

35.7

Associated Gene:

Gene:

HESX1

Ensembl Gene ID:

ENSAPLG00000005083

Chromosome:

PEDO01008705.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005250

2133 - 4084

1952