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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008705.1_3278_3587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3278 - 3587

Intron Length:

310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTAATCTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATC

Flanking Amino Acid:

RPRTAFNRNQIEVLENVFKM

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

82.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.4

0.59

0.9

36.3

Minor 5ss

36.8

-1.5

3.6

56.4

Minor BPS

0.7

1.1

78.22

31.1

Associated Gene:

Gene:

HESX1

Ensembl Gene ID:

ENSAPLG00000005083

Chromosome:

PEDO01008705.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005250

2133 - 4084

1952