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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008730.1_2203_2852_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2203 - 2852

Intron Length:

650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGCGGGGG

5'SS Class:

major

3'SS Sequence:

CCTCCCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

AACCCTATAATA

Flanking Amino Acid:

PGPFGMAQNGVPFGETRHVR

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.32

1.1

45.9

44.2

Major BPS

75.5

0.63

1.1

34.4

Major PPT

78.8

0.65

0.7

76.5

25.5

Minor 5ss

21.7

-3.3

3.3

19.7

37.9

Minor BPS

49.7

-0

1.6

57.31

35.9

Associated Gene:

Gene:

SMUG1

Ensembl Gene ID:

ENSAPLG00000025253

Chromosome:

PEDO01008730.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028020

828 - 3808

2981