Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008740.1_2311_2399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2311 - 2399

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGGCCC

5'SS Class:

major

3'SS Sequence:

GCCGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAG

U12 Branch Point Sequence:

GGCGCTTGAGCC

Flanking Amino Acid:

EKFVYVWWTWGRYWQVVDGA

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

57.4

41.8

Major BPS

46.9

-0.1

1.7

47.8

Major PPT

65.2

0.34

0.9

57.7

33.3

Minor 5ss

26.1

-2.7

36.4

Minor BPS

44.4

-0.4

1.7

48.49

41.4

Associated Gene:

Gene:

PMEL

Ensembl Gene ID:

ENSAPLG00000031111

Chromosome:

PEDO01008740.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026245

1471 - 4923

3453

ENSAPLT00000024076

1471 - 4923

3453