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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008740.1_3353_3470_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3353 - 3470

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GGGTCCCCAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAG

U12 Branch Point Sequence:

CCTTCCCCAGCC

Flanking Amino Acid:

TVAAGVTVAAGVVTAGDVAG

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

44.4

-0.3

1.6

54.3

42.9

Major PPT

59.2

0.21

52.4

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

46.1

-0.3

2.1

59.3

45.5

Associated Gene:

Gene:

PMEL

Ensembl Gene ID:

ENSAPLG00000031111

Chromosome:

PEDO01008740.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026245

1471 - 4923

3453

ENSAPLT00000024076

1471 - 4923

3453