Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008809.1_10294_10376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10294 - 10376

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

CTCTCCACCACC

Flanking Amino Acid:

KKLQHLPGHPGWYRKLCPRL

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

42.7

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

0.41

0.8

58.1

33.2

Minor 5ss

33.7

-1.9

2.8

31.9

42.5

Minor BPS

45.4

-0.3

2.2

59.37

45.7

Associated Gene:

Gene:

POLG

Ensembl Gene ID:

ENSAPLG00000004436

Chromosome:

PEDO01008809.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024855

4049 - 13391

9343

ENSAPLT00000004576

6647 - 13391

6745