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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008809.1_11549_11670_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11549 - 11670

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTGCGCCCGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

AAATAAAAAATT

Flanking Amino Acid:

KTRSKAEGPAVTAWDWVHVS

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

0.3

62.3

30.4

Major PPT

59.3

0.21

50.7

39.3

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

39.8

-0.7

2.1

56.14

39.3

Associated Gene:

Gene:

POLG

Ensembl Gene ID:

ENSAPLG00000004436

Chromosome:

PEDO01008809.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024855

4049 - 13391

9343

ENSAPLT00000004576

6647 - 13391

6745