Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008809.1_4877_5990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4877 - 5990

Intron Length:

1114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

CATTGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

AGGCACGGAACT

Flanking Amino Acid:

GMEKKYGIPQGEALDIYQLL

Intron Amino Acid Position:

1255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

79.1

0.65

0.9

69.5

41.3

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

42.4

-0.4

2.2

59.03

43.3

Associated Gene:

Gene:

POLG

Ensembl Gene ID:

ENSAPLG00000004436

Chromosome:

PEDO01008809.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024855

4049 - 13391

9343