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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008809.1_6152_7097_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
6152 - 7097

Intron Length:
946

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTGAGATGT

5'SS Class:
major

3'SS Sequence:
CCTGTGTTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGGCAC

U12 Branch Point Sequence:
ACGGCCCCACTT

Flanking Amino Acid:
LALQITNLLTRCMFAYKLGL

Intron Amino Acid Position:
1201

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
1
68.9
38.5

Major BPS
43
-0.4
1.5
48.8
46.3

Major PPT
77.7
0.62
0.9
68.3
42.2

Minor 5ss
34.7
-1.7
3.2
48.2
47.4

Minor BPS
39.2
-0.7
2
50.63
43.9

Associated Gene:

Gene:
POLG

Ensembl Gene ID:

Chromosome:
PEDO01008809.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4049 - 13391
9343