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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008809.1_7722_7911_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7722 - 7911

Intron Length:
190

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTGAGATGC

5'SS Class:
major

3'SS Sequence:
TCTGCTCCGATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTGAG

U12 Branch Point Sequence:
TCTGCTCCGATA

Flanking Amino Acid:
VHRLQREAARKSRSKKKWDV

Intron Amino Acid Position:
1074

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.6
0.6
1
65.7
34.9

Major BPS
54.7
0.12
1.7
57.1
49.4

Major PPT
65.7
0.35
1
61.7
35

Minor 5ss
34.6
-1.8
3.1
42
39

Minor BPS
43.6
-0.5
1.9
54.45
38.9

Associated Gene:

Gene:
POLG

Ensembl Gene ID:

Chromosome:
PEDO01008809.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6647 - 13391
6745

4049 - 13391
9343