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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008809.1_8035_8134_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8035 - 8134

Intron Length:
100

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGTGCT

5'SS Class:
strong_major

3'SS Sequence:
CGTTGCCACCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGCCAC

U12 Branch Point Sequence:
TCACCCCCAGCT

Flanking Amino Acid:
QMYAVTKGIRRFHLSEEGEW

Intron Amino Acid Position:
1033

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
0.9
74.9
35.3

Major BPS
52.3
0.06
1.4
64.2
43

Major PPT
64.4
0.33
1
54.7
40.5

Minor 5ss
28.5
-2.5
3.4
40.8
45.6

Minor BPS
44.7
-0.3
2
63.94
45.5

Associated Gene:

Gene:
POLG

Ensembl Gene ID:

Chromosome:
PEDO01008809.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4049 - 13391
9343

6647 - 13391
6745