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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008809.1_8599_8791_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8599 - 8791

Intron Length:
193

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTACGGCCG

5'SS Class:
major

3'SS Sequence:
CCATGTCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTGTAT

U12 Branch Point Sequence:
GTGTGCTGAGGT

Flanking Amino Acid:
PTWLTASNARADRVGSELKA

Intron Amino Acid Position:
906

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.2
0.41
1.2
49
47.1

Major BPS
53.8
0.09
1.6
57.4
49.1

Major PPT
68.2
0.41
0.9
61.4
34.7

Minor 5ss
29.6
-2.3
3.3
31
42.5

Minor BPS
42.7
-0.4
2.3
61.44
47.8

Associated Gene:

Gene:
POLG

Ensembl Gene ID:

Chromosome:
PEDO01008809.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4049 - 13391
9343

6647 - 13391
6745