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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008809.1_8910_8979_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8910 - 8979

Intron Length:
70

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGGGGA

5'SS Class:
major

3'SS Sequence:
TCCCCTATCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTCAC

U12 Branch Point Sequence:
TTTCCCCTATCC

Flanking Amino Acid:
KKGELPRAVTRHPDYNEEDD

Intron Amino Acid Position:
866

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1
64.2
42.1

Major BPS
52.1
0.05
1.3
57
41.8

Major PPT
73.4
0.53
0.8
65.1
34.9

Minor 5ss
27.5
-2.6
3.6
38.1
46.8

Minor BPS
59.2
0.27
2
77.14
38.6

Associated Gene:

Gene:
POLG

Ensembl Gene ID:

Chromosome:
PEDO01008809.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4049 - 13391
9343

6647 - 13391
6745