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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008809.1_9306_9402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9306 - 9402

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTGCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAAAAT

U12 Branch Point Sequence:

AGCCCCAAAATC

Flanking Amino Acid:

GCWFFKLPHKDGNANNVGSP

Intron Amino Acid Position:

795

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.12

0.8

74.7

41.2

Major BPS

48.3

-0.1

1.2

53.2

37.3

Major PPT

60.2

0.23

1.1

58.8

36.2

Minor 5ss

23.3

-3.1

3.6

32.3

42.2

Minor BPS

-0.4

1.9

51.95

39.1

Associated Gene:

Gene:

POLG

Ensembl Gene ID:

ENSAPLG00000004436

Chromosome:

PEDO01008809.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024855

4049 - 13391

9343

ENSAPLT00000004576

6647 - 13391

6745