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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008821.1_178_590_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

178 - 590

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGGGCTGA

5'SS Class:

weak_major

3'SS Sequence:

CCCCAGCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAG

U12 Branch Point Sequence:

TCTTCCCCAGGC

Flanking Amino Acid:

EGAEGQLFCLPLPILQMTPC

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.7

0.11

1.1

47.6

39.3

Major BPS

44.4

-0.3

1.8

57.1

49.4

Major PPT

63.4

0.3

0.9

52.6

36.4

Minor 5ss

38.9

-1.2

3.3

51.2

46.9

Minor BPS

43.4

-0.5

2.3

59.3

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030463

Chromosome:

PEDO01008821.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021354

46 - 1235

1190