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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008824.1_3027_3129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3027 - 3129

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

TTTTTGTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTGAT

U12 Branch Point Sequence:

TCACTCGTGATC

Flanking Amino Acid:

NFDALFKFSHISASTQEHLK

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

65.2

40.8

Major BPS

68.7

0.46

1.3

59.3

47.1

Major PPT

86.1

0.81

0.7

84.9

29.9

Minor 5ss

36.7

-1.5

47.6

41.5

Minor BPS

45.9

-0.3

54.7

Associated Gene:

Gene:

TMBIM6

Ensembl Gene ID:

ENSAPLG00000017808

Chromosome:

PEDO01008824.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041523

1497 - 4245

2749

ENSAPLT00000020689

2290 - 4245

1956