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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008836.1_582_671_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

582 - 671

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CTCGGTGCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAA

U12 Branch Point Sequence:

CCCCCCCTGACA

Flanking Amino Acid:

CLCGQMVLVLDCQLEKLPMR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

48.4

-0.1

1.2

56.4

39.5

Major PPT

0.32

56.8

38.7

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

49.3

-0

1.7

56.51

42.8

Associated Gene:

Gene:

CXorf56

Ensembl Gene ID:

ENSAPLG00000029514

Chromosome:

PEDO01008836.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041852

21 - 2847

2827

ENSAPLT00000040238

21 - 2847

2827

ENSAPLT00000036124

21 - 2847

2827

ENSAPLT00000025252

21 - 2847

2827