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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008839.1_10827_10955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10827 - 10955

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTGCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAGCAC

U12 Branch Point Sequence:

TGTGCCTCCAGC

Flanking Amino Acid:

VNLFTLSAVVGALELRLDTL

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

41.5

-0.5

1.3

37.8

Major PPT

69.7

0.44

0.9

58.6

38.4

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

44.6

-0.4

2.3

59.01

45.8

Associated Gene:

Gene:

KIAA0100

Ensembl Gene ID:

ENSAPLG00000003462

Chromosome:

PEDO01008839.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043249

2115 - 12393

10279

ENSAPLT00000041986

1978 - 12393

10416

ENSAPLT00000003589

2978 - 12393

9416