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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008839.1_5087_5159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5087 - 5159

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

AGGGCTCTGAGG

Flanking Amino Acid:

LEKQMYSNVKSLQDDSKNET

Intron Amino Acid Position:

1478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

80.6

0.69

0.8

77.4

31.4

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

39.3

-0.9

1.9

37.45

39.3

Associated Gene:

Gene:

KIAA0100

Ensembl Gene ID:

ENSAPLG00000003462

Chromosome:

PEDO01008839.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043249

2115 - 12393

10279

ENSAPLT00000041986

1978 - 12393

10416

ENSAPLT00000003589

2978 - 12393

9416