Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008839.1_6264_6343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6264 - 6343

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCGC

5'SS Class:

strong_major

3'SS Sequence:

CTCGCATCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGCAT

U12 Branch Point Sequence:

CTCCTCGCATCC

Flanking Amino Acid:

EREHGQLWLEVKNIEEHRQR

Intron Amino Acid Position:

1291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

63.1

43.4

Major BPS

57.6

0.19

1.4

38.9

Major PPT

63.4

0.3

0.8

54.5

35.5

Minor 5ss

32.8

-2

41.9

44.9

Minor BPS

38.4

-0.9

2.2

46.92

42.7

Associated Gene:

Gene:

KIAA0100

Ensembl Gene ID:

ENSAPLG00000003462

Chromosome:

PEDO01008839.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043249

2115 - 12393

10279

ENSAPLT00000041986

1978 - 12393

10416

ENSAPLT00000003589

2978 - 12393

9416