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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008839.1_6551_6667_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6551 - 6667

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGTGCCC

5'SS Class:

weak_major

3'SS Sequence:

TTTTCCCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

NCLIELVNCQMVLRGAETEG

Intron Amino Acid Position:

1222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.12

1.3

40.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.1

0.72

0.7

74.2

30.9

Minor 5ss

27.1

-2.6

3.2

34.8

41.1

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

KIAA0100

Ensembl Gene ID:

ENSAPLG00000003462

Chromosome:

PEDO01008839.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003589

2978 - 12393

9416

ENSAPLT00000043249

2115 - 12393

10279

ENSAPLT00000041986

1978 - 12393

10416