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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008839.1_7605_7678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7605 - 7678

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CCCGGCTGACCC

Flanking Amino Acid:

TRGTQRLIPQAGTVMRRLIS

Intron Amino Acid Position:

1003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

38.1

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

66.5

0.37

0.8

56.8

33.5

Minor 5ss

-0.9

49.2

Minor BPS

39.1

-0.8

2.1

41.78

45.3

Associated Gene:

Gene:

KIAA0100

Ensembl Gene ID:

ENSAPLG00000003462

Chromosome:

PEDO01008839.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043249

2115 - 12393

10279

ENSAPLT00000041986

1978 - 12393

10416

ENSAPLT00000003589

2978 - 12393

9416