Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008839.1_8877_8957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8877 - 8957

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGAGCT

5'SS Class:

major

3'SS Sequence:

CCGATGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAG

U12 Branch Point Sequence:

TGCCCCCGATGT

Flanking Amino Acid:

PPLKFYHDFHSEISQYTIVW

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.9

38.1

Major BPS

46.8

-0.2

1.6

41.8

Major PPT

63.4

0.3

53.3

41.4

Minor 5ss

-1.6

3.6

58.7

45.3

Minor BPS

39.5

-0.7

2.1

45.5

Associated Gene:

Gene:

KIAA0100

Ensembl Gene ID:

ENSAPLG00000003462

Chromosome:

PEDO01008839.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003589

2978 - 12393

9416

ENSAPLT00000043249

2115 - 12393

10279

ENSAPLT00000041986

1978 - 12393

10416