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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008866.1_1237_1314_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1237 - 1314

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGGT

5'SS Class:

strong_major

3'SS Sequence:

ACGCCGTGAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

GTGCCAGTGACC

Flanking Amino Acid:

GAAGPAEEEEGEQFVYREDW

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

72.2

39.5

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

52.8

0.06

1.1

46.9

39.7

Minor 5ss

27.6

-2.6

3.4

40.1

Minor BPS

44.5

-0.4

2.2

57.34

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030550

Chromosome:

PEDO01008866.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029286

21 - 4377

4357